151 publication(s) trouvée(s)
Article scientifique
Proteomic informed by transcriptomic for salivary glands components of the camel tick Hyalomma dromedarii
BACKGROUND: The hard tick Hyalomma dromedarii is one of the most injurious ectoparasites affecting camels and apparently best adapted to …
Article scientifique
Mapping gastrointestinal gene expression patterns in wild primates and humans via fecal RNA-seq
BACKGROUND: Limited accessibility to intestinal epithelial tissue in wild animals and humans makes it challenging to study patterns of intestinal …
Erratum
Correction to: Whole genome sequencing Mycobacterium tuberculosis directly from sputum identifies more genetic diversity than sequencing from culture
He authors reported that one of the authors’ names was typeset incorrectly in the authorship list.
Article scientifique
Evolutionary dynamics of ten novel Gamma-PVs: insights from phylogenetic incongruence, recombination and phylodynamic analyses
BACKGROUND: Human papillomaviruses (HPVs) are genetically diverse, belonging to five distinct genera: Alpha, Beta, Gamma, Mu and Nu. All papillomaviruses …
Article scientifique
Whole genome sequencing Mycobacterium tuberculosis directly from sputum identifies more genetic diversity than sequencing from culture
BACKGROUND: Repeated culture reduces within-sample Mycobacterium tuberculosis genetic diversity due to selection of clones suited to growth in culture and/or …
Article scientifique
Effect of paleopolyploidy and allopolyploidy on gene expression in banana
BACKGROUND: Bananas (Musa spp.) are an important crop worldwide. Most modern cultivars resulted from a complex polyploidization history that comprised …
Article scientifique
Polygenic and sex specific architecture for two maturation traits in farmed Atlantic salmon
BACKGROUND: A key developmental transformation in the life of all vertebrates is the transition to sexual maturity, whereby individuals are …
Article scientifique
RNA-seq based transcriptional analysis of Saccharomyces cerevisiae and Lachancea thermotolerans in mixed-culture fermentations under anaerobic conditions
BACKGROUND: In wine fermentation starter cultures, the blending of non-Saccharomyces yeast with Saccharomyces cerevisiae to improve the complexity of wine …
Article scientifique
Metagenomic and metatranscriptomic analysis of human prostate microbiota from patients with prostate cancer
BACKGROUND: Prostate cancer (PCa) is the most common malignant neoplasm among men in many countries. Since most precancerous and cancerous …
Article scientifique
Comparison of splenocyte microRNA expression profiles of pigs during acute and chronic toxoplasmosis
BACKGROUND: Toxoplasma gondii is an obligate intracellular parasite that infects humans and other warm-blooded animals. Previous quantitative proteomic analyses of …
Article scientifique
Comparative genomic analysis of Parageobacillus thermoglucosidasius strains with distinct hydrogenogenic capacities
The facultatively anaerobic thermophile Parageobacillus thermoglucosidasius produces hydrogen gas (H 2 ) by coupling CO oxidation to proton reduction in …
Article scientifique
Accuracy of RNAseq based SNP discovery and genotyping in Populusnigra
BACKGROUD: Populus nigra is a major tree species of ecological and economic importance for which several initiatives have been set …
Article scientifique
Synchronous birth is a dominant pattern in receptor-ligand evolution
BACKGROUND: Interactions between proteins are key components in the chemical and physical processes of living organisms. Among these interactions, membrane …
Article scientifique
Defence transcriptome assembly and pathogenesis related gene family analysis in Pinus tecunumanii (low elevation)
BACKGROUND: Fusarium circinatum is a pressing threat to the cultivation of many economically important pine tree species. Efforts to develop …
Article scientifique
Identifying mixed Mycobacterium tuberculosis infections from whole genome sequence data
BACKGROUND: Mixed, polyclonal Mycobacterium tuberculosis infection occurs in natural populations. Developing an effective method for detecting such cases is important …
Article scientifique
Full-length transcriptome sequences and the identification of putative genes for flavonoid biosynthesis in safflower
BACKGROUND: The flower of the safflower (Carthamus tinctorius L.) has been widely used in traditional Chinese medicine for the ability …
Article scientifique
Genome-wide DNA methylation patterns of bovine blastocysts derived from in vivo embryos subjected to in vitro culture before, during or after embryonic genome activation
BACKGROUND: Aberrant DNA methylation patterns of genes required for development are common in in vitro produced embryos. In this regard, …
Article scientifique
EuGI: a novel resource for studying genomic islands to facilitate horizontal gene transfer detection in eukaryotes
BACKGROUND: Genomic islands (GIs) are inserts of foreign DNA that have potentially arisen through horizontal gene transfer (HGT). There are …
Article scientifique
Genome-wide transcriptional analyses in Anopheles mosquitoes reveal an unexpected association between salivary gland gene expression and insecticide resistance
BACKGROUND: To combat malaria transmission, the Ugandan government has embarked upon an ambitious programme of indoor residual spraying (IRS) with …
Article scientifique
Challenges imposed by minor reference alleles on the identification and reporting of clinical variants from exome data
BACKGROUND: The conventional variant calling of pathogenic alleles in exome and genome sequencing requires the presence of the non-pathogenic alleles …